This page records the observed terminal motifs for the 3' end of the 18S rDNA locus, the 5' and 3' ends of the 5.8S rDNA locus, and the 5' end of the 28S rDNA locus. In Amanita these terminal motifs often have a few adjacent bases [in either ITS1 or ITS2] that appear to be somewhat stable within one or more sections of the genus. Using the sequences that we have certified as based on vouchers revised in either the Yang or Tulloss laboratories, we have explored:On this page we catalog our findings.
- the rDNA terminal motifs
- the terminal sequences of ITS1 and ITS2
Below there is a drawing showing the order of the components in fungal nuclear ribosomal DNA. The drawing is followed by outlined blocks providing examples of the (relatively) conserved terminal motifs of the 18S, 5.8S, and 28S segments (pale purple background in the outlined blocks) and the adjacent sequences of bases found at the termini of the ITS1 and ITS2 segments (black background in the outlined blocks).The ordering (top to bottom) of blocks follows 5' to 3' ordering of elements in the nrDNA. Motifs and other strings are supplied without alignments and are based on character count.5'... 18S (SSU) ITS1 5.8S ITS2 28S (LSU) ...3'
18S highly conserved 3' terminal motif
5'... 18S (SSU) ITS1 5.8S ITS2 28S (LSU) ...3'
Amanita section Amanita
This data is based on 75 sequences representing 21 taxa.[20 species (73 seq)]a 5'... GGATCATTA 3'
Notes:
[A. inculta (1 seq)] 5'... AGATCATTA 3'
[A. inculta (1 seq)] 5'... GGGTCATTA 3'
- A. albocreata (7 seq), A. aprica (2 seq), A. breckonii (1 seq), A. concentrica (1 seq), A. cruzii (2 seq), A. fibrillopes (1 seq), A. frostiana (5 seq), A. grandis (2 seq), A. ibotengutake (12 seq), A. levistriata (11 seq), A. muscaria (2 seq), A. oleosa (3 seq), A. parcivolvata (3 seq), A. pseudoinculta (4 seq), A. regalis (3 seq), A. roseitincta (3 seq), A. sinensis (2 seq), A. sp-N60 (4 seq), A. subglobosa (2 seq) and A. wellsii (3 seq).
Amanita section Caesareae
This data is based on 18 sequences representing 11 species.[8 species (14 seq)]a 5'... GGATCATTA 3'
Notes:
- A. banningiana (1 seq), A. belizeana (1 seq), A. calyptratoides (1 seq), A. cochiseana (4 seq), A. affin. mafingensis (2 seq), A. affin. masasiensis (1 seq), A. roseolamellata (3 seq), A. rubromarginata (1 seq), A. spreta (1 seq), A. tanzanica (1 seq) and A. vernicoccora (2 seq).
Amanita section Vaginatae
This data is based on 120 sequences representing 32 species.[32 species (120 seq)]a 5'... GGATCATTA 3'
Notes:
- A. albiceps (1 seq), A. arenicola (3 seq), A. basiana (1 seq), A. crassiputamen (1 seq), A. fulva (7 seq), A. drummondii (6 seq), A. friabilis (4 seq), A. homolalittenii (4 seq), A. lippiae (1 seq), A. minnesorora (1 seq), A. mortenii (3 seq), A. olivaceogrisea (4 seq), A. pahasapaensis (2 seq), A. penetratrix (7 seq), A. populiphila (12 seq), A. protecta (5 seq), A. sp-58 (1 seq), A. punctata sensu A. E. Wood (1 seq), A. rhacopus (17 seq), A. sp-Arora 01-555 (1 seq), A. sp-GSM03 (1 seq), A. sp-GSM04 (6 seq), A. sp-GSM05 (1 seq), A. sp-GSM07 (1 seq), A. sp-MO04 (1 seq), A. sp-NW04 (1 seq), A. subnigra (3 seq), A. supravolvata (1 seq), A. texasorora (14 seq), A. trygonion (1 seq), A. variicolor (1 seq), and A. xanthomitra (7 seq).
Amanita section Amidella
This data is based on 12 sequences representing 1 species.[A. whetstoneae (12 seq)] 5'... GGATCATTA 3'
Amanita section Lepidella
This data is based on 29 sequences representing 16 species.[16 species (29 seq)]a 5'... GGATCATTA3'
Notes:
- A. armillariiformis (1 seq), A. inopinata (1 seq), A. kotohiraensis (2 seq), A. lesueurii (1 seq), A. macrocarpa (2 seq), A. magniverrucata (1 seq), A. manicata (1 seq), A. nauseosa (1 seq), A. prairiicola (1 seq), A. pruittii (7 seq), A. quenda (1 seq), A. silvicola (1 seq), A. silvifuga (1 seq), A. thiersii (1 seq), A. wadjukiorum (4 seq), and A. zangii (3 seq).
Amanita section Phalloideae
This data is based on 89 sequences representing 18 taxa.[18 species (89 seq)]a 5'... GGATCATTA 3'
Notes:
- A. amerivirosa (4 seq), A. bisporigera (5 seq), Amanita exitialis (4 seq), A. fuliginea (5 seq), A. fuligineoides (3 seq), A. griseoturcosa (1 seq), A. manginiana sensu W. F. Chiu (1 seq), A. marmorata (1 seq), A. oberwinklerana (3 seq), A. pallidorosea (12 seq), A. phalloides (5 seq), A. rimosa (6 seq), A. sp-Kerala01 (2 seq), A. sp-O01 (4 seq), A. suballiacea (6 seq), A. subjunquillea (14 seq), A. subpallidorosea (8 seq), and A. virosa (5 seq).
Amanita section Validae
This data is based on 86 sequences representing 11 species.[11 species (86 seq)]a 5'... GGATCATTA 3'
Notes:
- A. augusta (4 seq), A. brunnescens (12 seq), A. congolensis (3 seq), A. cruetilemurum (18 seq), A. flavoconia (1 seq), A. lavendula (24 seq), A. morrisii (6 seq), A. novinupta (3 seq), A. orsonii (2 seq), A. porphyria (12 seq), and A. sp-MO03 (1 seq).
ITS1 observed 5' terminal strings
5'... 18S (SSU) ITS1 5.8S ITS2 28S (LSU) ...3'
Amanita section Amanita
This data is based on 78 sequences representing 22 taxa.5' TTGAAA ...3' [13 species (44 seq)]a
Notes:
5' TTGAAG ...3' [3 species (9 seq)]b
5' TTGAAT ...3' [2 species (6 seq)]c
5' ATGAAG ...3' [2 species (5 seq)]d
5' CTGAAA ...3' [A. fibrillopes (2 seq)]
5' ATGAAT ...3' [A. levistriata (11 seq)]
- A. albocreata (7 seq), A. aprica (2 seq), A. breckonii, A. concentrica, A. cruzii (2 seq), A. frostiana (5 seq), A. ibotengutake (12 seq), A. muscaria (2 seq), A. parvipantherina (2 seq), A. regalis (3 seq), A. roseitincta (3 seq), A. sinensis (2 seq), and A. subglobosa (2 seq).
- A. grandis (2 seq), A. oleosa (3 seq), and A. sp-N60 (4 seq).
- A. parcivolvata (3 seq) and A. wellsii (3 seq).
- A. pseudoinculta (4 seq) and A. inculta (1 seq).
Amanita section Caesareae
This data is based on 83 sequences representing 31 species.5' TTGGAA ...3' [24 species (68 seq)]a
Notes:
5' TTGGAT ...3' [7 species (15 seq)]b
- A. banningiana (2 seq), A. basii (5 seq), A. caesarea (3 seq), A. calyptratoides (3 seq), A. calyptroderma (6 seq), A. cinnamomescens (4 seq), A. cochiseana (7 seq), A. garabitoana (2 seq), A. jacksonii (5 seq), A. affin. mafingensis (4 seq), A. affin. masasiensis (2 seq), A. murrilliana (2 seq), A. ristichii (2 seq), A. roseolamellata (3 seq), A. rubromarginata (2 seq), A. sp-f11 (2 seq), A. sp-m36 (2 seq), A. sp-jack2 (1 seq), A. sp-jack3 (1 seq), A. sp-T31 (1 seq), A. tanzanica (1 seq), A. affin. tanzanica (1 seq), A. vernicoccora (5 seq), and A. virginiana (2 seq).
- A. belizeana (2 seq), A. recutita sensu Coker (1 seq), A. sp-Thai03 (4 seq), A. spreta (4 seq), A. vernicoccora (1 seq), A. yuaniana (1 seq), and A. zambiana (2 seq).
Amanita section Vaginatae
This data is based on 117 sequences representing 33 species.5' TTGAAT ...3' [19 species (86 seq)]a
Notes:
5' TCGAAT ...3' [4 species (12 seq)]b
5' TTGAAC ...3' [3 species (3 seq)]c
5' GAGAAT ...3' [2 species (7 seq)]d
5' TTGAGC ...3' [A. arenicola (4 seq)]
5' CTGCAT ...3' [A. penetratrix (4 seq)]
5' TTGCAT ...3' [A. penetratrix (3 seq)]
5' TTGTTT ...3' [A. sp-Arora 01-555 (1 seq)]
5' TCGAAC ...3' [A. sp-N48 (1 seq)]
5' TTGTAT ...3' [A. trygonion (1 seq)]
- A. albiceps (1 seq), A. basiana (1 seq), A. crassiputamen (1 seq), A. fulva (7 seq), A. friabilis (4 seq), A. lippiae (1 seq), A. minnesorora (1 seq), A. pahasapaensis (2 seq), A. populiphila (12 seq), A. protecta (5 seq), A. rhacopus (17 seq), A. sp-58 (1 seq), A. sp-GSM04 (6 seq), A. sp-GSM05 (1 seq), A. subnigra (3 seq), A. supravolvata (1 seq), A. texasorora (14 seq), A. variicolor (1 seq), and A. xanthomitra (7 seq).
- A. homolalittenii (4 seq), A. mortenii (3 seq), A. olivaceogrisea (4 seq) and A. sp-MO04 (1 seq).
- A. sp-GSM03 (1 seq), A. sp-GSM07 (1 seq), and A. sp-NW04 (1 seq).
- A. drummondii (6 seq) and A. punctata sensu A. E. Wood (1 seq).
Amanita section Amidella
This data is based on 13 sequences representing 1 species.5' TTGAAT ...3' [A. whetstoneae (13 seq)]
Amanita section Lepidella
This data is based on 30 sequences representing 17 species.5' TTGAAT ...3' [7 species (14 seq)]a
Notes:
5' TTGAAA ...3' [5 species (9 seq)]b
5' CTGAAT ...3' [A. armillariiformis (1 seq)]
5' TCGAGT ...3' [A. kotohiraensis (1 seq)]
5' TTGAAC ...3' [A. silvicola (1 seq)]
5' ATGAAA ...3' [A. thiersii (1 seq)]
5' ATGAAT ...3' [A. zangii (3 seq)]
- A. inopinata (1 seq), A. kotohiraensis (1 seq), A. magniverrucata (1 seq), A. prairiicola (1 seq), A. pruittii (8 seq), A. quenda (1 seq), and A. silvifuga (1 seq).
- A. lesueurii (1 seq), A. macrocarpa (2 seq), A. manicata (1 seq), A. nauseosa (1 seq), and A. wadjukiorum (4 seq).
Amanita section Phalloideae
This data is based on 91 sequences representing 18 taxa.5' CTGAAA ...3' [5 species (34 seq)]a
Notes:
5' ATGAAA ...3' [5 species (27 seq)]b
5' AAGAAA ...3' [2 species (11 seq)]c
5' TTGAAA ...3' [2 species (4 seq)]d
5' ATGAGA ...3' [2 species (10 seq)]e
5' ATGAAC ...3' [A. fuligineoides (3 seq)]
5' TTGAAC ...3' [A. griseoturcosa (1 seq)]
5' AAGAGA ...3' [A. rimosa (1 seq)]
- A. amerivirosa (4 seq), A. bisporigera (5 seq), A. pallidorosea (12 seq), A. subpallidorosea (8 seq), and A. virosa (5 seq).
- A. exitialis (4 seq), A. marmorata (1 seq), A. phalloides (5 seq), A. sp-Kerala01 (2 seq), and A. subjunquillea (15 seq).
- A. fuliginea (5 seq) and A. rimosa (6 seq).
- A. manginiana sensu W. F. Chiu (1 seq) and A. oberwinklerana (3 seq).
- A. sp-O01 (4 seq) and A. suballiacea (6 seq).
Amanita section Validae
This data is based on 90 sequences representing 13 species.5' CTGAAC ...3' [5 species (29 seq)]a
Notes:
5' TTGAAC ...3' [4 species (40 seq)]b
5' CTGAGC ...3' [2 species (6 seq)]c
5' CCGAAC ...3' [A. novinupta (3 seq)]
5' TTGAAG ...3' [A. porphyria (12 seq)]
- A. cruetilemurum (18 seq), A. flavoconia (2 seq), A. fritillaria (1 seq), A. morrisii (6 seq), and A. orsonii (2 seq).
- A. brunnescens (12 seq), A. congolensis (3 seq), A. lavendula (24 seq), and A. sepiacea (1 seq).
- A. augusta (4 seq) and A. sp-MO03 (2 seq).
ITS1 observed 3' terminal strings
5'... 18S (SSU) ITS1 5.8S ITS2 28S (LSU) ...3'
Amanita section Amanita
This data is based on 121 sequences representing 34 taxa.[7 taxa (32 seq)]a 5'... AAAGAGTAAT 3'
Notes:
[7 taxa (29 seq)]b 5'... AAATAGTAAT 3'
[4 species (11 seq)]c 5'... AAATAATAAT 3'
[2 species (5 seq)]d 5'... GAAGTAAAAT 3'
[2 species (5 seq)]e 5'... TAAAATAAAT 3'
[2 species (2 seq)]f 5'... ATGAATAAAT 3'
[A. concentrica (1 seq)]5'... TAAAAGTAAC 3'
[A. fibrillopes (2 seq)]5'... ACAAGTAAAT 3'
[A. grandis (2 seq)]5'... TATAAAATGT 3'
[A. ibotengutake (2 seq)]5'... AAGAGTAATA 3'
[A. inculta (1 seq)]5'... TAAAATATAT 3'
[A. levistriata (11 seq)]5'... ATTATAGTGC 3'
[A. oleosa (3 seq)]5'... AATATAATGT 3'
[A. orientigemmata (1 seq)]5'... AAAAAGTAAT 3'
[A. pakistanica (1 seq)]5'... AAAAGTAATA 3'
[A. parcivolvata (3 seq)]5'... AAACAATAAT 3'
[A. parvipantherina (3 seq)]5'... TAAAAGTAAT 3'
[A. pseudogemmata (1 seq)]5'... ATTATAATGC 3'
[A. sinensis (2 seq)]5'... GTAATACAAT 3'
[A. sp-N60 (3 seq)]5'... GAAAAGTAAT 3'
[A. sp-N60 (1 seq)]5'... AAGAGTAAAT 3'
- A. altipes (1 seq), A. albocreata (7 seq), A. breckonii (4 seq), A. ibotengutake (10 seq), A. muscaria subsp. flavivolvata (1 seq), A. persicina (6 seq), and A. regalis (3 seq).
- A. aprica (2 seq), A. chrysoblema (1 seq), A. muscaria (13 seq), A. muscaria subsp. flavivolvata (4 seq), A. muscaria var. guessowii (7 seq), A. sp-LG862 (1 seq), and A. sp-LG864 (1 seq).
- A. frostiana (5 seq), A. subfrostiana (1 seq), A. wellsii (3 seq), and A. subglobosa (2 seq).
- A. cruzii (2 seq) and A. roseitincta (3 seq).
- A. pseudoinculta (4 seq) and A. inculta (1 seq).
- A. sp-LG1045 (1 seq) and A. sp-LG1066 (1 seq).
Amanita section Caesareae
This data is based on 93 sequences representing 36 species.[5 species (13 seq)]a 5'... ATATATATAT 3'
Notes:
[4 species (8 seq)]b 5'... ATGTATCTAC 3'
[3 species (7 seq)]c 5'... TAAACAATAT 3'
[3 species (5 seq)]d 5'... ATATGTGTGT 3'
[3 species (10 seq)]e 5'... TAATATATAT 3'
[2 species (4 seq)]f 5'... AAATATATAC 3'
[2 species (4 seq)]g 5'... ATAATATTGC 3'
[2 species (4 seq)]h 5'... AAACAAATAT 3'
[A. banningiana (3 seq)] 5'... AACAAAATAT 3'
[A. caesarea (3 seq)] 5'... ATGTATCTAT 3'
[A. cochiseana (6 seq)] 5'... ATAAATATAT 3'
[A. egregia (1 seq)] 5'... TATATATTAT 3'
[A. hemibapha (1 seq)] 5'... TAATATTATA 3'
[A. affin. mafingensis (1 seq)] 5'... ATATGTTTGT 3'
[A. affin. masasiensis (2 seq)] 5'... TATATATAAT 3'
[A. roseolamellata (3 seq)] 5'... TAATAATAAT 3'
[A. rubromarginata (2 seq)] 5'... ATAAAATAAT 3'
[A. sp-Thai03 (4 seq)] 5'... TGTATATTAT 3'
[A. affin. tanzanica (1 seq)] 5'... ATATGTGTAT 3'
[A. vernicoccora (6 seq)] 5'... TTTATTATAT 3'
[A. vernicoccora (1 seq)] 5'... TTTRTTATAT 3'
[A. yuaniana (1 seq)] 5'... AAACAATATT 3'
[A. zambiana (2 seq)] 5'... AAAATATAAT 3'
[A. zambiana (1 seq)] 5'... AAAATATGAT 3'
- A. arkansana (1 seq), A. basii (5 seq), A. cinnamomescens (4 seq), A. cochiseana (1 seq), and A. garabitoana (2 seq).
- A. jacksonii (5 seq), A. sp-jack2 (1 seq), A. sp-jack3 (1 seq), and A. sp-T31 (1 seq).
- A. belizeana (2 seq), A. recutita sensu Coker (1 seq), and A. spreta (4 seq).
- A. mafingensis (1 seq), A. affin. mafingensis (3 seq), A. tanzanica (1 seq).
- A. arkansana (2 seq), A. basii (1 seq), and A. calyptroderma (7 seq).
- A. calyptratoides (3 seq) and A. tlaxcandela (1 seq).
- A. murrilliana (2 seq) and A. sp-M36 (2 seq).
- A. ristichii (2 seq) and A. virginiana (2 seq).
Amanita section Vaginatae
This data is based on 134 sequences representing 39 species.[4 species (4 seq)]a 5'... TAATAAATAT 3'
Notes:
[3 species (5 seq)]b 5'... ATAATAAAAT 3'
[2 species (8 seq)]c 5'... AATAAAATAT 3'
[2 species (5 seq)]d 5'... AATAAATAAT 3'
[A. albiceps (1 seq)] 5'... ATAATAAATT 3'
[A. arenicola (7 seq)] 5'... CAAACATTGT 3'
[A. basiana (1 seq)] 5'... TATTAAAAAT 3'
[A. crassiputamen (1 seq)] 5'... TATATAAAAT 3'
[A. drummondii(6 seq) 5'... AGATAAATAT 3'
[A. friabilis (3 seq)] 5'... ATAAATAAAT 3'
[A. griseofolia(1 seq) 5'... ATGAAAATAT 3'
[A. lippiae (1 seq)] 5'... TAACAAAAGT 3'
[A. liquii (1 seq)] 5'... GTATTATAAT 3'
[A. madagascariensis (1 seq)] 5'... CCCAAAAAAT 3'
[A. minnesorora (2 seq)] 5'... TAATAAAATT 3'
[A. mortenii (3 seq)] 5'... ATGACAATAT 3'
[A. olivaceogrisea (4 seq)] 5'... TGATAATATT 3'
[A. pahasapaensis (2 seq)] 5'... TAAATAAAAT 3'
[A. penetratrix (7 seq)] 5'... ATAAAATTTG 3'
[A. populiphila (12 seq)] 5'... TATAAAGTAT 3'
[A. protecta (5 seq)] 5'... TATATAAAGT 3'
[A. pseudovaginata (1 seq)] 5'... TATATATAAT 3'
[A. rhacopus (17 seq)] 5'... ATGATAATAT 3'
[A. sp-58 (1 seq)] 5'... ATATATAAAT 3'
[A. sp-Arora 01-555 (1 seq)] 5'... AAAGTTTTTA 3'
[A. sp-GSM03 (1 seq)] 5'... TAATAAAAAT 3'
[A. sp-GSM04 (6 seq)] 5'... ATAACATTTT 3'
[A. sp-GSM05 (1 seq)] 5'... TTATATAAAT 3'
[A. sp-N48 (1 seq)] 5'... AAATAAAAAT 3'
[A. texasorora (16 seq)] 5'... AATAATATAT 3'
[A. trygonion (1 seq)] 5'... AACAAAAATG 3'
[A. variicolor (1 seq)] 5'... ATATTAAAAT 3'
[A. xanthomitra (7 seq)] 5'... ATATATATAT 3'
- A. atrofusca (1 seq) and A. orientifulva (1 seq) and A. sp-GSM07 (1 seq).
- A. friabilis (1 seq), A. subnigra (3 seq) and A. supravolvata (1 seq).
- A. fulva (7 seq), A. punctata sensu A. E. Wood (1 seq).
- A. homolalittenii (4 seq) and A. sp-MO04 (1 seq).
Amanita section Amidella
This data is based on 18 sequences representing 3 species.[A. avellaneosquamosa (1 seq)] 5'... AAGTTTAAAT 3'
[A. rufobrunnescens (2 seq)] 5'... AAGTTCAAGT 3'
[A. whetstoneae (14 seq)] 5'... AAGTTTGAAT 3'
[A. whetstoneae (1 seq)] 5'... ATGTTTGAAT 3'
Amanita section Lepidella
This data is based on 35 sequences representing 20 species.[4 species (11 seq)]a 5'... AACAAATAAT 3'
Notes:
[2 species (2 seq)]b 5'... AAACAAATAT 3'
[A. armillariiformis (1 seq)] 5'... AAACAATAAT 3'
[ A. gilbertii (1 seq)] 5'... AATATTAAAT 3'
[ A. kotohiraensis (1 seq)] 5'... GTAACTAAAT 3'
[ A. kotohiraensis (1 seq)] 5'... GTTATATTAA 3'
[ A. lesueurii (1 seq)] 5'... AAAAGGAAAT 3'
[ A. macerisolum (3 seq)] 5'... CTTTAAATAT 3'
[ A. macrocarpa (2 seq)] 5'... GTAATTAAAA 3'
[ A. magniverrucata (1 seq)] 5'... AAAAATAAAC 3'
[ A. quenda (1 seq)] 5'... ACAATAAAAT 3'
[ A. silvicola (1 seq)] 5'... ATGATAAAGT 3'
[ A. solitaria (1 seq)] 5'... TAAAAATTAT 3'
[ A. thiersii (1 seq)] 5'... AAATAACTAT 3'
[ A. wadjukiorum (4 seq)] 5'... GAAAATAAAT 3'
[ A. zangii (3 seq)] 5'... GCATTAAAGT 3'
- A. inopinata (1 seq), A. manicata (1 seq), A. nauseosa (1 seq), and A. pruittii (8 seq).
- A. prairiicola (1 seq) and A. silvifuga (1 seq).
Amanita section Phalloideae
This data is based on 101 sequences representing 21 taxa.[5 species (20 seq)]a 5'... TATATAAAGT 3'
Notes:
[4 species (16 seq)]b 5'... AATATAAAAT 3'
[3 species (20 seq)]c 5'... AATATAAAGT 3'
[2 species (3 seq)]d 5'... GTAATAAAGT 3'
[2 taxa (9 seq)]e 5'... AATGTAAAAT 3'
[A. fuliginea (6 seq)] 5'... AATATGAAAT 3'
[A. griseoturcosa (1 seq)] 5'... AAATATAAAT 3'
[A. manginiana sensu W. F. Chiu (1 seq)] 5'... AAAAAATATT 3'
[A. oberwinklerana (3 seq)] 5'... AAATAAAAGT 3'
[A. pallidorosea (6 seq)] 5'... ATATATAAAT 3'
[A. pallidorosea (7 seq)] 5'... GAATATAAAT 3'
[A. rimosa (8 seq)] 5'... CATGTAAAGT 3'
[A. subjunquillea (1 seq)] 5'... AGTATAAAGT 3'
- A. exitialis (5 seq), A. fuligineoides (3 seq), A. sp-O01 (4 seq), A. suballiacea (7 seq), and A. subjunquillea (1 seq).
- A. amerivirosa (4 seq), A. bisporigera (5 seq), A. ocreata (1 seq), and A. virosa (6 seq).
- A. phalloides (6 seq), A. subjunquillea (13 seq), and A. verna (1 seq).
- A. marmorata (1 seq) and A. sp-Kerala01 (2 seq).
- A. subjunquillea var. alba (1 seq) and A. subpallidorosea (8 seq).
Amanita section Validae
This data is based on 91 sequences representing 13 species.[7 species (37 seq)]a 5'... ATGATAAAAT 3'
Notes:
[5 species (53 seq)]b 5'... ATGATAAAGT 3'
[A. fritillaria (1 seq)] 5'... ATGATGAAAT 3'
- A. augusta (4 seq), A. cruetilemurum (18 seq), A. flavoconia (2 seq), A. morrisii (6 seq), A. novinupta (3 seq), A. orsonii (2 seq), and A. sp-MO03 (2 seq).
- A. brunnescens (12 seq), A. congolensis (3 seq), A. lavendula (24 seq), A. porphyria (13 seq), and A. sepiacea (1 seq).
5.8S largely conserved 5' terminal motifs
5'... 18S (SSU) ITS1 5.8S ITS2 28S (LSU) ...3'
Amanita section Amanita
This data is based on 120 sequences representing 35 taxa.5' ACAACTTTCAAC ...3' [35 taxa (116 seq)]a
Notes:
5' ACAACTATCAAC ...3' [A. inculta (1 seq)]
5' ATAACTTTCAAC ...3' [A. muscaria subsp. flavivolvata (1 seq)]
5' ACAACTTTTAAC ...3' [A. muscaria var. guessowii (1 seq)]
5' ACAATTTTCAAC ...3' [A. pseudoinculta (1 seq)]
- A. albocreata (7 seq), A. altipes (1 seq), A. aprica (2 seq), A. breckonii (3 seq), A. chrysoblema (1 seq), A. concentrica (1 seq), A. cruzii (2 seq), A. fibrillopes (2 seq), A. frostiana (5 seq), A. grandis (2 seq), A. ibotengutake (12 seq), A. inculta (1 seq), A. levistriata (11 seq), A. muscaria (13 seq), A. muscaria subsp. flavivolvata (4 seq), A. muscaria var. guessowii (6 seq), A. oleosa (3 seq), A. orientigemmata (1 seq), A. pakistanica (1 seq), A. parcivolvata (3 seq), A. parvipantherina (3 seq), A. persicina (6 seq), A. pseudogemmata (1 seq), A. pseudoinculta (3 seq), A. regalis (3 seq), A. roseitincta (3 seq), A. sinensis (2 seq), A. sp-LG1045 (1 seq), A. sp-LG1066 (1 seq), A. sp-LG862 (1 seq), A. sp-LG864 (1 seq), A. sp-N60 (4 seq), A. subfrostiana (1 seq), A. subglobosa (2 seq), and A. wellsii (3 seq).
Amanita section Caesareae
This data is based on 95 sequences representing 35 species.5'ACAACTTTCAACAAT ...3' [30 species (82 seq)]a
Notes:
5'ACAACTTTCAACAAC ...3' [4 species (8 seq)]b
5'ATAACTTTCAACAAT ...3' [2 species (5 seq)]b
- A. arkansana (3 seq), A. banningiana (3 seq), A. basii (6 seq), A. belizeana (2 seq), A. caesarea (3 seq), A. calyptroderma (7 seq), A. cochiseana (7 seq), A. egregia (1 seq), A. garabitoana (2 seq), A. hemibapha (1 seq), A. jacksonii (5 seq), A. mafingensis (1 seq), A. affin. mafingensis (4 seq), A. affin. masasiensis (2 seq), A. recutita sensu Coker (1 seq), A. ristichii (2 seq), A. roseolamellata (3 seq), A. rubromarginata (2 seq), A. sp-AR01 (1 seq), A. sp-jack2 (1 seq), A. sp-jack3 (1 seq), A. sp-T31 (1 seq), A. sp-Thai03 (4 seq), A. spreta (4 seq), A. tanzanica (2 seq), A. affin. tanzanica (1 seq), A. vernicoccora (7 seq), A. virginiana (1 seq), A. yuaniana (1 seq), and A. zambiana (3 seq).
- A. calyptratoides (3 seq), A. murrilliana (2 seq), A. sp-M36 (2 seq), and A. tlaxcandela (1 seq).
- A. cinnamomescens (4 seq) and A. virginiana (1 seq)
Amanita section Vaginatae
This data is based on 134 sequences representing 39 species.5' ACAACTTTCAACAAT ...3' [25 species (87 seq)]a
Notes:
5' ACAACTTTCAACAAC ...3' [12 species (45 seq)]b
5' ATAACTTTCAACAAT ...3' [A. madagascariensis (1 seq)]
5' ATAACTTTCAACAAC ...3' [A. trygonion (1 seq)]
- A. albiceps (1 seq), A. arenicola (7 seq), A. basiana (1 seq), A. crassiputamen (1 seq), A. drummondii (6 seq), A. friabilis (4 seq), A. homolalittenii (4 seq), A. lippiae (1 seq), A. liquii (1 seq), A. minnesorora (2 seq), A. mortenii (3 seq), A. olivaceogrisea (4 seq), A. pahasapaensis (2 seq), A. populiphila (12 seq), A. protecta (5 seq), A. pseudovaginata (1 seq), A. punctata sensu A. E. Wood (1 seq), A. sp-58 (1 seq), A. sp-Arora 01-555 (1 seq), A. sp-GSM05 (1 seq), A. sp-MO04 (1 seq), A. subnigra (3 seq), A. texasorora (16 seq), A. variicolor (1 seq), and A. xanthomitra (7 seq).
- A. atrofusca (1 seq), A. fulva (7 seq), A. griseofolia (1 seq), A. orientifulva (1 seq), A. penetratrix (7 seq), A. rhacopus (17 seq), A. sp-GSM03 (1 seq), A. sp-GSM04 (6 seq), A. sp-GSM07 (1 seq), A. sp-N48 (1 seq), A. sp-NW04 (1 seq), and A. supravolvata (1 seq).
Amanita section Amidella
This data is based on 18 sequences representing 3 species.5' ACAACTTTCAACAAT ...3' [3 species (17 seq)]a
Notes:
5' ACAACTTTCAATAAT ...3' [A. whetstoneae (1 seq)]
- A. avellaneosquamosa (1 seq), A. rufobrunnescens (2 seq), and A. whetstoneae (14 seq).
Amanita section Lepidella
This data is based on 35 sequences representing 20 species.5' ACAACTTTCAACAAC ...3' [14 species (27 seq)]a
Notes:
5' ACAACTTTCAACAAT ...3' [4 species (6 seq)]b
5' ACAACTTTCAATAAC ...3' [A. wadjukiorum (1 seq)]
5' ATAACTTTCAACAAT ...3' [A. quenda (1 seq)]
- A. armillariiformis (1 seq), A. gilbertii (1 seq), A. inopinata (1 seq), A. lesueurii (1 seq), A. macerisolum (3 seq), A. manicata (1 seq), A. nauseosa (1 seq), A. prairiicola (1 seq), A. pruittii (8 seq), A. silvicola (1 seq), A. silvifuga (1 seq), A. thiersii (1 seq), A. wadjukiorum (3 seq), and A. zangii (3 seq).
- A. kotohiraensis (2 seq), A. macrocarpa (2 seq), A. magniverrucata (1 seq), and A. solitaria (1 seq).
Amanita section Phalloideae
This data is based on 101 sequences representing 21 taxa.5' ACAACTTTCAACAAC ...3' [18 taxa (96 seq)]a
Notes:
5' ACAACTTTCAACAAT ...3' [2 species (4 seq)]b
5' ACAACTTTCAACACG ...3' [A. ocreata (1 seq)]
- A. amerivirosa (4 seq), A. bisporigera (5 seq), A. exitialis (5 seq), A. fuliginea (6 seq), A. fuligineoides (3 seq), A. griseoturcosa (1 seq), A. marmorata (1 seq), A. pallidorosea (13 seq), A. phalloides (6 seq), A. rimosa (8 seq), A. sp-Kerala01 (2 seq), A. sp-O01 (4 seq), A. suballiacea (7 seq), A. subjunquillea (16 seq), A. subjunquillea var. alba (1 seq), A. subpallidorosea (8 seq), A. verna (1 seq), and A. virosa (6 seq).
- A. manginiana (1 seq) and A. oberwinklerana (3 seq).
Amanita section Validae
This data is based on 91 sequences representing 13 species.5' ACAACTTTCAACAAC ...3' [13 species (90 seq)]a
Notes:
5' GCAACTTTCAACAAC ...3' [A. cruetilemurum (1 seq)]
- A. augusta (4 seq), A. brunnescens (12 seq), A. congolensis (3 seq), A. cruetilemurum (17 seq), A. flavoconia (2 seq), A. fritillaria (1 seq), A. lavendula (24 seq), A. morrisii (6 seq), A. novinupta (4 seq), A. orsonii (2 seq), A. porphyria (13 seq), A. sepiacea (1 seq), and A. sp-MO03 (2 seq).
5.8S somewhat conserved 3' terminal motifs
5'... 18S (SSU) ITS1 5.8S ITS2 28S (LSU) ...3'
Amanita section Amanita
This data is based on 119 sequences representing 35 taxa.[33 taxa (113 seq)]a 5'... CATGCCTGTTTGAGTGTCATTAAA 3'
Notes:
[A. grandis (1 seq)] 5'... CATGCCTGTTTGAGTGTCATTTAA 3'
[A. oleosa (1 seq)] 5'... CATGCCTGTTTGAGTGTTGTTAAA 3'
[A. oleosa (1 seq)] 5'... TATGCCTGTTTGAGTGTCGTTAAA 3'
[A. oleosa (1 seq)] 5'... CATGCCTGTTTGAGTGTCGTTAAA 3'
[A. pseudoinculta (1 seq)] 5'... CATGCATGTTTGAGTGTCATTAAA 3'
[A. pseudoinculta (1 seq)] 5'... CATGCCTGTTTGAGTGTCATTATA 3'
- A. albocreata (7 seq), A. altipes (1 seq), A. aprica (2 seq), A. breckonii (3 seq), A. chrysoblema (1 seq), A. concentrica (1 seq), A. cruzii (2 seq), A. fibrillopes (2 seq), A. frostiana (5 seq), A. grandis (1 seq), A. ibotengutake (12 seq), A. inculta (2 seq), A. levistriata (11 seq), A. muscaria (13 seq), A. muscaria subsp. flavivolvata (5 seq), A. muscaria var. guessowii (7 seq), A. orientigemmata (1 seq), A. parcivolvata (3 seq), A. parvipantherina (3 seq), A. persicina (6 seq), A. psuedogemmata (1 seq), A. pseudoinculta (2 seq), A. regalis (3 seq), A. roseitincta (3 seq), A. sinensis (2 seq), A. sp-LG1045 (1 seq), A. sp-LG1066 (1 seq), A. sp-LG862 (1 seq), A. sp-LG864 (1 seq), A. sp-N60 (4 seq), A. subfrostiana (1 seq), A. subglobosa (2 seq), and A. wellsii (3 seq).
Amanita section Caesareae
This data is based on 92 sequences representing 35 species.[29 species (79 seq)]a 5'... CATGCCTGTTTGAGTGTCATTAA 3'
Notes:
[3 species (7 seq)]b 5'... CATGCTTGTTTGAGTGTCATTAA 3'
[A. caesarea (3 seq)] 5'... CATGCCTGTTTGAGTGTCACTAA 3'
[A. affin. masasiensis (2 seq)] 5'.. CATGCCTGTTTGAGTGTCATTTA 3'
[A. affin. tanzanica (1 seq)] 5'... CATGCTTGTTTGAGTGTCATTAG 3'
- A. arkansana (3 seq), A. banningiana (3 seq), A. basii (6 seq), A. belizeana (2 seq), A. calyptratoides (3 seq), A. calyptroderma (7 seq), A. cinnamomescens (4 seq), A. cochiseana (6 seq), A. egregia (1 seq), A. garabitoana (2 seq), A. hemibapha (1 seq), A. jacksonii (5 seq), A. murrilliana (2 seq), A. recutita sensu Coker (1 seq), A. ristichii (2 seq), A. roseolamellata (3 seq), A. rubromarginata (2 seq), A. sp-AR01 (1 seq), A. sp-jack2 (1 seq), A. sp-jack3 (1 seq), A. sp-M36 (2 seq), A. sp-T31 (1 seq), A. sp-Thai03 (3 seq), A. spreta (4 seq), A. tlaxcandela (1 seq), A. vernicoccora (6 seq), A. virginiana (2 seq), A. yuaniana (1 seq), and A. zambiana (3 seq).
- A. mafingensis (1 seq), A. affin. mafingensis (4 seq), A. tanzanica (2 seq).
Amanita section Vaginatae
This data is based on 134 sequences representing 39 species.[24 species (84 seq)]a 5'... CATGCCTGTTTGAGTGTCATTAAA 3'
Notes:
[7 species (25 seq)]b 5'... CATGCCTGTTTGAGTGTCGTTAAA 3'
[2 species (7 seq)]c 5'... CATGCCTGTTTGAGGGTCATTAAA 3'
[A. friabilis (1 seq)] 5'... AATGCCTGTTTGAGTGTCGTTAAA 3'
[A. penetratrix (7 seq)] 5'... TATGCCTGTTTGAGTGTCATAAAA 3'
[A. sp-Arora 01-555 (1 seq)] 5'... CATGCCTGTTTGAGTGTCATCTTA 3'
[A. sp-GSM04 (1 seq)] 5'... CATGCCTGTTTGAGTGTCGCTAAA 3'
[A. sp-N48 (1 seq)] 5'... CATGCCTGTTTGAGTGTCGTTGAA 3'
[A. trygonion (1 seq)] 5'... CATGCCTGTTTGAGTGTCATAAAA 3'
- A. albiceps (1 seq), A. arenicola (7 seq), A. atrofusca (1 seq), A. crassiputamen (1 seq), A. fulva (7 seq), A. drummondii (6 seq), A. friabilis (3 seq), A. griseofolia (1 seq), A. homolalittenii (4 seq), A. lippiae (1 seq), A. liquii (1 seq), A. minnesorora (2 seq), A. orientifulva (1 seq), A. punctata sensu A. E. Wood (1 seq), A. rhacopus (17 seq), A. sp-58 (1 seq), A. sp-GSM03 (1 seq), A. sp-GSM05 (1 seq), A. sp-GSM07 (1 seq), A. sp-MO04 (1 seq), A.sp-NW04 (1 seq), A. texasorora (16 seq), A. variicolor (1 seq), and A. xanthomitra (7 seq).
- A. pahasapaensis (2 seq), A. populiphila (12 seq), A. protecta (5 seq), A. pseudovaginata (1 seq), A. sp-GSM04 (5 seq), A. subnigra (3 seq), and A. supravolvata (1 seq).
- A. mortenii (3 seq) and A. olivaceogrisea (4 seq).
Amanita section Amidella
This data is based on 18 sequences representing 3 species.5' TATGCCTGTTTGAGTGTCATTTAA ...3' [A. avellaneosquamosa (1 seq)]
5' CATGCCTGTTTGAGTGTTGTTAAA ...3' [A. rufobrunnescens (2 seq)]
5' CATGCCTGTTTGAGTGTTGTTAAA ...3' [A. whetstoneae (15 seq)]
Amanita section Lepidella
This data is based on 35 sequences representing 20 species.[7 species (16 seq)]a 5'... CATGCCTGTTTGAGTGTCAGTAAA 3'
Notes:
[4 species (7 seq)]b 5'... CATGCCTGTTTGAGTGTCATTAAA 3'
[2 species (2 seq)]c 5'... TATGCCTGTTTGAGTGTCGTTAAA 3'
[2 species (2 seq)]d 5'... CATGCCTGTTTGAGTGTCGTTAAA 3'
[A. gilbertii (1 seq)] 5'... TATGCCTGTTTGAGTGTCATTAAA 3'
[A. nauseosa (1 seq)] 5'... CATGCCTGTTTGAGTGTCAGTCAA 3'
[A. silvicola (1 seq)] 5'... CATGCCTGTTTGAGTGTCATTAAG 3'
[A. thierii (1 seq)] 5'... CATGCCTGTTTGAGTGTCAGTATA 3'
[A. wadjukiorum (4 seq)] 5'... CATGCCTGTTTGAGTGTCATTATT 3'
- A. armillariiformis (1 seq), A. inopinata (1 seq), A. macerisolum (3 seq), A. manicata (1 seq), A. prairiicola (1 seq), A. pruittii (8 seq), and A. silvifuga (1 seq).
- A. kotohiraensis (2 seq), A. lesueurii (1 seq), A. magniverrucata (1 seq), and A. zangii (3 seq).
- A. macrocarpa (1 seq) and A. quenda (1 seq).
- A. macrocarpa (1 seq) and A. solitaria (1 seq).
Amanita section Phalloideae
This data is based on 101 sequences representing 21 species.[9 species (42 seq)]a 5'... CATGCCTGTTTGAGTGTCATTAAA 3'
Notes:
[8 taxa (38 seq)]b 5'... CATGCCTGTTTGAGTGTCATTAAC 3'
[A. fuligineoides (3 seq)] 5'... CATGCCTGTTTGAGTGTCATTGAA 3'
[A. griseoturcosa (1 seq)] 5'... TATACCTGTTTGAGTGTCATTAAA 3'
[A. oberwinklerana (3 seq)] 5'... CATGCCTGTTTGAGTGTCATTATA 3'
[A. rimosa (7 seq)] 5'... CATGCCTGTTTGAGTGTCATTAAT 3'
[A. rimosa (1 seq)] 5'... CATGCCTGTCTGAGTGTCATTAAT 3'
- A. exitialis (5 seq), A. manginiana sensu W. F. Chiu (1 seq), A. marmorata (1 seq), A. phalloides (6 seq), A. sp-Kerala01 (2 seq), A. sp-O01 (4 seq), A. suballiacea (7 seq), A. subjunquillea (15 seq) and A. verna (1 seq).
- A. amerivirosa (4 seq), A. bisporigera (5 seq), A. fuliginea (6 seq), A. ocreata (1 seq), A. pallidorosea (13 seq), A. subjunquillea var. alba (1 seq), A. subpallidorosea (8 seq), and A. virosa (6 seq).
Amanita section Validae
This data is based on 91 sequences representing 13 species.[9 species (51 seq)]a 5'... CATGCCTGTTTGAGTGTCATTAAA 3'
Notes:
[2 species (24 seq)]b 5'... CATGCCTGTTTGAGTGTCATTAAG 3'
[A. congolensis (3 seq)] 5'... CATGCCTGTTTGAGTGTCATCAAT 3'
[A. porphyria (13 seq)] 5'... CATGCCTGTTTGAGTGTCATTCAA 3'
- A. augusta (4 seq), A. brunnescens (12 seq), A. cruetilemurum (18 seq), A. flavoconia (2 seq), A. fritillaria (1 seq), A. morrisii (6 seq), A. novinupta (4 seq), A. orsonii (2 seq), and A. sp-MO03 (2 seq).
- A. lavendula (23 seq) and A. sepiacea (1 seq).
ITS2 observed 5' terminal strings
5'... 18S (SSU) ITS1 5.8S ITS2 28S (LSU) ...3'
Amanita section Amanita
This data is based on 118 sequences representing 35 taxa.5' TTCTGTCAAA ...3' [21 species (72 seq)]a
Notes:
5' TTCTCTCAAA ...3' [4 taxa (12 seq)]b
5' TCCTCAAAAC ...3' [2 species (6 seq)]c
5' TTCTCTCGAA ...3' [2 species (6 seq)]d
5' TTTTGTCAAA ...3' [A. fibrillopes (2 seq)]
5' TTAACTCAAA ...3' [A. grandis (1 seq)]
5' TTATCTCAAA ...3' [A. grandis (1 seq)]
5' CACCTCAAGA ...3' [A. levistriata (10 seq)]
5' TTCTCTCAAC ...3' [A. muscaria var. guessowii (4 seq)]
5' ATCATCTCAA ...3' [A. oleosa (2 seq)]
5' ATCGTCTCAA ...3' [A. oleosa (1 seq)]
5' CATCTCAAGA ...3' [A. pseudogemmata (1 seq)]
- A. albocreata (7 seq), A. altipes (1 seq), A. aprica (2 seq), A. concentrica (1 seq), A. cruzii (2 seq), A. frostiana (5 seq), A. ibotengutake (12 seq), A. muscaria (13 seq), A. orientigemmata (1 seq), A. parvipantherina (3 seq), A. persicina (6 seq), A. regalis (3 seq), A. roseitincta (3 seq), A. sinensis (2 seq), A. sp-LG1045 (1 seq), A. sp-LG1066 (1 seq), A. sp-LG862 (1 seq), A. sp-LG864 (1 seq), A. sp-N60 (4 seq), A. subfrostiana (1 seq), and A. subglobosa (2 seq).
- A. breckonii (3 seq), A. chrysoblema (1 seq), A. muscaria subsp. flavivolvata (5 seq), and A. muscaria var. guessowii (3 seq).
- A. parcivolvata (3 seq) and A. wellsii (3 seq).
- A. inculta (2 seq), and A. pseudoinculta (4 seq).
Amanita section Caesareae
This data is based on 92 sequences representing 35 species.5' TCTCTCAAAA ...3' [18 species (55 seq)]a
Notes:
5' TCTCTCTCAA ...3' [6 species (14 seq)]b
5' TTTCTCAAAA ...3' [3 species (7 seq)]c
5' TATCTCAAAA ...3' [2 species (4 seq)]d
5' TCTATCAAAA ...3' [2 species (4 seq)]e
5' ATCTCTCAAA ...3' [2 species (5 seq)]f
5' TCTCTCTCGA ...3' [A. mafingensis (1 seq)]
5' ATCTCTCTCA ...3' [A. affin. masasiensis (2 seq)]
- A. arkansana (3 seq), A. basii (6 seq), A. caesarea (3 seq), A. calyptroderma (7 seq), A. cinnamomescens (4 seq), A. cochiseana (6 seq), A. garabitoana (2 seq), A. hemibapha (1 seq), A. jacksonii (5 seq), A. rubromarginata (2 seq), A. sp-AR01 (1 seq), A. sp-jack2 (1 seq), A. sp-jack3 (1 seq), A. sp-T31 (1 seq), A. vernicoccora (6 seq), A. virginiana (2 seq), A. yuaniana (1 seq), and A. zambiana (3 seq).
- A. belizeana (2 seq), A. affin. mafingensis (4 seq), A. recutita sensu Coker (1 seq), A. spreta (4 seq), A. tanzanica (2 seq), and A. affin. tanzanica (1 seq).
- A. banningiana (3 seq), A. calyptratoides (3 seq), and A. tlaxcandela (1 seq).
- A. egregia (1 seq) and A. sp-Thai03 (3 seq).
- A. murilliana (2 seq) and A. sp-M36 (2 seq).
- A. ristichii (2 seq) and A. roseolamellata (3 seq).
Amanita section Vaginatae
This data is based on 134 sequences representing 39 species.5' CTATCAAAAC ...3' [22 species (59 seq)]a
Notes:
5' CTATCGAAAC ...3' [4 species (12 seq)]b
5' ATATCAAAAC ...3' [2 species (7 seq)]c
5' CCATCAAAAC ...3' [2 species (4 seq)]d
5' CTATCAAAAT ...3' [2 species (17 seq)]e
5' CTTATCAAAA ...3' [2 species (8 seq)]f
5' CTATCAAAGC ...3' [2 species (18 seq)]g
5' CTCTCAAAAC ...3' [A. griseofolia (1 seq)]
5' ACTTATCAAA ...3' [A. lippiae (1 seq)]
5' ATCTATCAAA ...3' [A. madagascariensis (1 seq)]
5' AACTTCAAAC ...3' [A. sp-Arora 01-555 (1 seq)]
- A. albiceps (1 seq), A. arenicola (7 seq), A. atrofusca (1 seq), A. basiana (1 seq), A. crassiputamen (1 seq), A. fulva (7 seq), A. friabilis (1 seq), A. minnesorora (2 seq), A. orientifulva (1 seq), A. pahasapaensis (2 seq), A. populiphila (12 seq), A. protecta (5 seq), A. pseudovaginata (1 seq), A. sp-58 (1 seq), A. sp-GSM03 (1 seq), A. sp-GSM04 (6 seq), A. sp-GSM05 (1 seq), A. sp-NW04 (1 seq), A. subnigra (3 seq), A. supravolvata (1 seq), A. variicolor (1 seq), and A. xanthomitra (7 seq).
- A. homolalittenii (4 seq), A. mortenii (3 seq), A. olivaceogrisea (4 seq) and A. sp-MO04 (1 seq).
- A. drummondii (6 seq) and A. punctata sensu A. E. Wood (1 seq).
- A. friabilis (3 seq) and A. sp-GSM03 (1 seq).
- A. liquii (1 seq), and A. texasorora (16 seq).
- A. penetratrix (7 seq) and A. sp-N48 (1 seq).
- A. rhacopus (17 seq) and A. trygonion (1 seq).
Amanita section Amidella
This data is based on 18 sequences representing 3 species.5' ATTCTCAAAA ...3' [A. avellaneosquamosa (1 seq)]
5' TTCTCAAAAG ...3' [A. rufobrunnescens (2 seq)]
5' ATTCTCAAAA ...3' [A. whetstoneae (15 seq)]
Amanita section Lepidella
This data is based on 35 sequences representing 19 species.5' TTCTCAAACC ...3' [4 species (11 seq)]a
Notes:
5' TTCTCAAATG ...3' [3 species (3 seq)]b
5' TTGTCAAAAA ...3' [2 species (2 seq)]c
5' ACATCAAAAA ...3' [A. gilbertii (1 seq)]
5' TTAATCAAAG ...3' [A. kotohiraensis (1 seq)]
5' CTCTCAAAAA ...3' [A. macerisolum (3 seq)]
5' TTGTCAAAGG ...3' [A. macrocarpa (1 seq)]
5' TATCTCAAAA ...3' [A. silvicola (1 seq)]
5' TTATCAAAGT ...3' [A. solitaria (1 seq)]
5' ATTCTCGAAA ...3' [A. wadjukiorum (1 seq)]
5' ATCTCAAGAC ...3' [A. zangii (3 seq)]
- A. inopinata (1 seq), A. prairiicola (1 seq), A. pruittii (8 seq), and A. silvifuga (1 seq).
- A. armillariiformis (1 seq), A. manicata (1 seq), and A. nauseosa (1 seq).
- A. magniverrucata (1 seq) and A. quenda (1 seq).
Amanita section Phalloideae
This data is based on 101 sequences representing 21 taxa.5' ATCTCAAGAC ...3' [7 taxa (34 seq)]a
Notes:
5' GTCTCAAGAC ...3' [4 species (15 seq)]b
5' TTCTCAAGAC ...3' [3 species (22 seq)]c
5' ATCTCAATAC ...3' [A. fuliginea (6 seq)]
5' ATCTCAAGGC ...3' [A. fuligineoides (3 seq)]
5' ACATCAAAAG ...3' [A. griseoturcosa (1 seq)]
5' TTATCAAAAT ...3' [A. manginiana sensu W. F. Chiu (1 seq)]
5' TTGTCAAAAA ...3' [A. oberwinklerana (3 seq)]
5' ATTTCAAGAC ...3' [A. ocreata (1 seq)]
5' ACCTCAAGAC ...3' [A. pallidorosea (13 seq)]
5' GTCTCAAAAC ...3' [A. suballiacea (2 seq)]
- A. amerivirosa (4 seq), A. bisporigera (5 seq), A. rimosa (8 seq), A. sp-Kerala01 (2 seq), A. subjunquillea var. alba (1 seq), A. subpallidorosea (8 seq), and A. virosa (6 seq).
- A. exitialis (5 seq), A. marmorata (1 seq), A. sp-O01 (4 seq), and A. suballiacea (5 seq).
- A. phalloides (6 seq), A. subjunquillea (15 seq), and A. verna (1 seq).
Amanita section Validae
This data is based on 92 sequences representing 13 species.5' TATCTCAAAA ...3' [11 species (67 seq)]a
Notes:
5' GTATCTCAAAA ...3' [2 species (25 seq)]b
- A. augusta (4 seq), A. congolensis (3 seq), A. cruetilemurum (18 seq), A. flavoconia (2 seq), A. fritillaria (1 seq), A. lavendula (24 seq), A. morrisii (6 seq), A. novinupta (4 seq), A. orsonii (2 seq), A. sepiacea (1 seq), and A. sp-MO03 (2 seq).
- A. brunnescens (12 seq) and A. porphyria (13 seq).
ITS2 observed 3' terminal strings
5'... 18S (SSU) ITS1 5.8S ITS2 28S (LSU) ...3'
Amanita section Amanita
This data is based on 121 sequences representing 35 taxa.[16 taxa (60 seq)]a 5'... GTCTGATAAC 3'
Notes:
[2 species (5 seq)]b 5'... CTTGAAACAC 3'
[2 species (5 seq)]c 5'... TGTAACCAAC 3'
[A. aprica (2 seq)] 5'... TCTGATAAAT 3'
[A. grandis (1 seq)] 5'... GACCACTTTT 3'
[A. grandis (1 seq)] 5'... TTTTTTTTAT 3'
[A. ibotengutake (12 seq)] 5'... CCCTGATAAC 3'
[A. inculta (1 seq)] 5'... GCTGAACACT 3'
[A. inculta (1 seq)] 5'... GCTGAACATT 3'
[A. levistriata (9 seq)] 5'... TTTGAACAAC 3'
[A. muscaria subsp. flavivolvata (4 seq)] 5'... TCTTGATAAC 3'
[A. oleosa (1 seq)] 5'... ACCCTTTTTT 3'
[A. oleosa (1 seq)] 5'... CCCTTTTTTT 3'
[A. oleosa (1 seq)] 5'... ACACCCTTTT 3'
[A. persicina (1 seq)] 5'... GTATGATAAC 3'
[A. pseudoinculta (3 seq)] 5'... GTTGAACACT 3'
[A. pseudoinculta (1 seq)] 5'... GATTCAGTTG 3'
[A. sp-LG1045 (1 seq)] 5'... GTCTCATAAC 3'
[A. sp-LG1066 (1 seq)] 5'... GTCTCATAAC 3'
[A. sp-LG864 (1 seq)] 5'... GTCTGATAAA 3'
- A. albocreata (7 seq), A. breckonii (3 seq), A. chrysoblema (1 seq), A. concentrica (1 seq), A. fibrillopes (2 seq), A. frostiana (5 seq), A. muscaria (13 seq), A. muscaria subsp. flavivolvata (1 seq), A. muscaria var guessowii (7 seq), A. parvipantherina (3 seq), A. persicina (5 seq), A. regalis (3 seq), A. sinensis (2 seq), A. sp-LG862, A. sp-N60 (4 seq), and A. subglobosa (2 seq).
- A. cruzii (2 seq) and A. roseitincta (3 seq).
- A. parcivolvata (2 seq) and A. wellsii (3 seq).
Amanita section Caesareae
This data is based on 17 sequences representing 10 species.5' GTTGGCCAAA ...3' [2 species (2 seq)]a
Notes:
5' ATCTTAATGA ...3' [2 species (6 seq)]b
5' CTTTAAATGA ...3' [2 species (3 seq)]c
5' ACCCCCCAAA ...3' [A. banningiana (1 seq)]
5' CTTTGATAAA ...3' [A. calyptratoides (1 seq)]
5' ATTGACCAAA ...3' [A. roseolamellata (3 seq)]
5' CTTTTAATGA ...3' [A. rubromarginata (1 seq)]
- A. belizeana (1 seq) and A. spreta (1 seq).
- A. cochiseana (4 seq) and A. vernicoccora (2 seq).
- A. affin. mafingensis (2 seq) and A. tanzanica (1 seq).
Amanita section Vaginatae
This data is based on 134 sequences representing 39 species.[3 species (6 seq)]a 5'... TAATACCCCT 3'
Notes:
[2 species (3 seq)]b 5'... TCGATGCCCC 3'
[2 species (2 seq)]c 5'... AAATACCCCT 3'
[2 species (19 seq)]d 5'... AAATGCCCCT 3'
[2 species (7 seq)]e 5'... CATATAAGCC 3'
[2 species (5 seq)]f 5'... TTCTTTAAAT 3'
[2 species (33 seq)]g 5'... TGGACACCCT 3'
[2 species (2 seq)]h 5'... AACTGCCCCT 3'
[A. arenicola (5 seq)] 5'... TTCTGTCCCT 3'
[A. basiana (1 seq)] 5'... CCCCCCTCCT 3'
[A. lippiae (1 seq)] 5'... TCTTAAAACT 3'
[A. mortenii (3 seq)] 5'... TATGCCCCCT 3'
[A. olivaceogrisea (4 seq)] 5'... TGTGCCCCCT 3'
[A. penetratrix (7 seq)] 5'... TTATGATTCA 3'
[A. protecta (5 seq)] 5'... AAATGCTCCT 3'
[A. sp-58 (1 seq)] 5'... AATGCCCCAT 3'
[A. sp-Arora 01-555 (1 seq)] 5'... ACATTTCTAT 3'
[A. sp-GSM03 (1 seq)] 5'... TTCCCCCCCT 3'
[A. sp-GSM04 (6 seq)] 5'... TCATGACCAT 3'
[A. sp-GSM05 (1 seq)] 5'... AATGCACCCT 3'
[A. sp-N48 (1 seq)] 5'... TGCTTCCCCT 3'
[A. trygonion (1 seq)] 5'... TTATGACTTA 3'
[A. variicolor (1 seq)] 5'... AAACCCTCCT 3'
[A. xanthomitra (7 seq)] 5'... TTGCCCCCCT 3'
- A. friabilis (1 seq), A. pahasapaensis (2 seq), and A. subnigra (3 seq).
- A. albiceps (1 seq) and A. minnesorora (2 seq).
- A. crassiputamen (1 seq) and A. supravolvata (1 seq).
- A. fulva (7 seq) and A. populiphila (12 seq).
- A. drummondii (6 seq) and A. punctata sensu A. E. Wood (1 seq).
- A. homolalittenii (4 seq) and A. sp-MO04 (1 seq).
- A. rhacopus (17 seq) and A. texasorora (16 seq).
- A. sp-GSM07 (1 seq) and A. sp-NW04 (1 seq).
Amanita section Amidella
This data is based on 15 sequences representing 1 species.5' ATTGACTGAC ...3' [A. whetstoneae (15 seq)]
Amanita section Lepidella
This data is based on 30 sequences representing 17 species.[2 species (7 seq)]a 5'... ATTGACAATC 3'
Notes:
[2 species (2 seq)]b 5'... TCTGACCATC 3'
[A. armillariiformis (1 seq)] 5'... GTTGATAATC 3'
[A. kotohiraensis (1 seq)] 5'... AGTTTGAAAG 3'
[A. kotohiraensis (1 seq)] 5'... ATTGATCAAG 3'
[A. lesueurii (1 seq)] 5'... TTTGGAAAAG 3'
[A. macerisolum (3 seq)] 5'... ATAGTTGTCA 3'
[A. macrocarpa (2 seq)] 5'... TTGAACAAGT 3'
[A. magniverrucata (3 seq)] 5'... ATTAAGAAAG 3'
[A. prairiicola (1 seq)] 5'... TTTGATACTC 3'
[A. quenda (1 seq)] 5'... TACACATAAT 3'
[A. silvicola (1 seq)] 5'... AATGATAAAC 3'
[A. silvifuga (1 seq)] 5'... TCTGACAATT 3'
[A. wadjukiorum (3 seq)] 5'... AAAAGAAAAC 3'
[A. wadjukiorum (1 seq)] 5'... AAAAGAAGAC 3'
[A. zangii (2 seq)] 5'... AAAAACAAAC 3'
[A. zangii (1 seq)] 5'... AAAACAATAC 3'
- A. inopinata (1 seq) and A. pruittii (6 seq).
- A. manicata (1 seq) and A. nauseosa (1 seq).
Amanita section Phalloideae
This data is based on 94 sequences representing 17 species.[7 species (44 seq)] a 5'... CTTGACCAAC 3'
Notes:
[6 species (22 seq)] b 5'... TTTGACCAAC 3'
[2 species (11 seq)] c 5'... TCTGACCCAC 3'
[2 species (2 seq)] d 5'... ACTGACCAAC 3'
[A. fuligineoides (3 seq)] 5'... TTGACCCAAC 3'
[A. griseoturcosa (1 seq)] 5'... GACATTAAAG 3'
[A. oberwinklerana (2 seq)] 5'... AATGATAAAA 3'
[A. oberwinklerana (1 seq)] 5'... AATGATAAAG 3'
[A. pallidorosea (7 seq)] 5'... TCTGACTCAC 3'
A. subjunquillea (1 seq) 5'... CTCGACCAAC 3'
- A. amerivirosa (4 seq), A. phalloides (5 seq), A. rimosa (8 seq), A. subjunquillea (13 seq), A. subpallidorosea (8 seq), A. verna (1 seq), and A. virosa (5 seq).
- A. exitialis (4 seq), A. fuliginea (5 seq), A. marmorata (1 seq), A. sp-Kerala01 (2 seq), A. sp-O01 (4 seq), and A. suballiacea (6 seq).
- A. bisporigera (5 seq) and A. pallidorosea (6 seq).
- A. phalloides (1 seq) and A. subjunquillea (1 seq).
Amanita section Validae
This data is based on 88 sequences representing 13 species.[5 species (27 seq)]a 5'... TATGATAAAC 3'
Notes:
[4 species (7 seq)]b 5'... CATGATAAAC 3'
[A. brunnescens (12 seq)] 5'... GATGACGAAC 3'
[A. congolensis (2 seq)] 5'... CATGATGAAC 3'
[A. cruetilemurum (4 seq)] 5'... ATATATAAAC 3'
[A. lavendula (24 seq)] 5'... ATTGATGAAC 3'
[A. porphyria (12 seq)] 5'... TATGATAAAA 3'
- A. cruetilemurum (14 seq), A. flavoconia (2 seq), A. morrisii (6 seq), A. novinupta (3 seq), and A. orsonii (2 seq).
- A. augusta (4 seq), A. fritillaria (1 seq), A. sepiacea (1 seq), and A. sp-MO03 (1 seq).
28S rRNA highly conserved 5' terminus motif
5'... 18S (SSU) ITS1 5.8S ITS2 28S (LSU) ...3'
Amanita section Amanita
This data is based on 108 sequences representing 29 taxa.5' TTGACCTCAAATCA ...3' [28 taxa (103 seq)]a
Notes:
5' TTGGCCTCAAATCA ...3' [A. aprica (2 seq)]
5' TTGACATCAAATCA ...3' [A. pseudoinculta (2 seq)]
5' TTAGACGTCAAATCA ...3' [A. grandis (1 seq)]
- A. albocreata (7 seq), A. breckonii (2 seq), A. chrysoblema (1 seq), A. concentrica (1 seq), A. cruzii (2 seq), A. fibrillopes (2 seq), A. frostiana (5 seq), A. grandis (1 seq), A. ibotengutake (12 seq), A. inculta (2 seq), A. levistriata (9 seq), A. muscaria (13 seq), A. muscaria subsp. flavivolvata (5 seq), A. muscaria var. guessowii (7 seq), A. oleosa (3 seq), A. parcivolvata (2 seq), A. persicina (6 seq), A. pseudoinculta (2 seq), A. regalis (3 seq), A. roseitincta (3 seq), A. sinensis (2 seq), A. sp-LG1045, A. sp-LG1066, A. sp-LG862, A. sp-LG864, A. sp-N60, A. subglobosa (2 seq), and A. wellsii (3 seq).
Amanita section Caesareae
This data is based on 17 sequences representing 10 species.5' TTGACCTCAAATCA ...3' [10 species (17 seq)]a
Notes:
- A. banningiana (1 seq), A. belizeana (1 seq), A. calyptratoides (1 seq), A. cochiseana (4 seq), A. affin. mafingensis (2 seq), A. roseolamellata (3 seq), A. rubromarginata (1 seq), A. spreta (1 seq), A. tanzanica (1 seq), and A. vernicoccora (2 seq).
Amanita section Vaginatae
This data is based on 125 sequences representing 33 species.5' T-TGACCTCAAATCA ...3' [27 species (107 seq)]a
Notes:
5' TCTGACCTCAAATCA ...3' [6 species (18 seq)]b
- A. arenicola (4 seq), A. basiana (1 seq), A. crassiputamen (1 seq), A. fulva (7 seq), A. friabilis (4 seq), A. homolalittenii (4 seq), A. lippiae (1 seq), A. mortenii (3 seq), A. olivaceogrisea (4 seq), A. pahasapaensis (2 seq), A. populiphila (12 seq), A. protecta (5 seq), A. rhacopus (17 seq), A. sp-58 (1 seq), A. sp-Arora 01-555 (1 seq), A. sp-GSM03 (1 seq), A. sp-GSM04 (6 seq), A. sp-GSM05 (1 seq), A. sp-GSM07 (1 seq), A. sp-MO04 (1 seq), A. sp-N48 (1 seq), A. sp-NW04 (1 seq), A. subnigra (3 seq), A. supravolvata (1 seq), A. texasorora (16 seq), A. variicolor (1 seq), and A. xanthomitra (7 seq).
- A. albiceps (1 seq), A. drummondii (6 seq), A. minnesorora (2 seq), A. penetratrix (7 seq), A. punctata sensu A. E. Wood (1 seq), and A. trygonion (1 seq).
Amanita section Amidella
This data is based on 15 sequences representing 1 species.5' TTGACCTCAAATCA ...3' [A. whetstoneae (15 seq)]
Amanita section Lepidella
This data is based on 24 sequences representing 15 species.5' TTGACCTCAAATCA ...3' [13 species (20 seq)]a
Notes:
5' TTGGCCTCAAATCA ...3' [A. magniverrucata (1 seq)]
5' ATGACCTCAAATCA ...3' [A. quenda (1 seq)]
5' TTGACCTCAAGTCA ...3' [A. kotohiraensis (1 seq)]
5' TTGATCTCAAATTA ...3' [A. wadjukiorum (1 seq)]
- A. armillariiformis (1 seq), A. inopinata (1 seq), A. kotohiraensis (1 seq), A. lesueurii (1 seq), A. macrocarpa (2 seq), A. manicata (1 seq), A. nauseosa (1 seq), A. prairiicola (1 seq), A. pruittii (5 seq), A. silvicola (1 seq), A. silvifuga (1 seq), A. wadjukiorum (3 seq), and A. zangii (1 seq).
Amanita section Phalloideae
This data is based on 49 sequences representing 17 species.5' TTGACCTCAAATCA ...3' [16 species (46 seq)]a
Notes:
5' TCGACCTCAAATCA ...3' [A. oberwinklerana (3 seq)]
- A. bisporigera (4 seq), A. exitialis (3 seq), A. fuliginea (2 seq), A. fuligineoides (3 seq), A. griseoturcosa (1 seq), A. marmorata (1 seq), A. pallidorosea (6 seq), A. phalloides (5 seq), A. rimosa (4 seq), A. sp-Kerala01 (2 seq), A. sp-O01 (2 seq), A. suballiacea (2 seq), A. subjunquillea (7 seq), A. subpallidorosea (2 seq), A. verna (1 seq), and A. virosa (4 seq).
Amanita section Validae
This data is based on 81 sequences representing 10 species.5' TTGACCTCAAATCA ...3' [10 species (81 seq)]a
Notes:
- A. augusta (4 seq), A. brunnescens (11 seq), A. congolensis (2 seq), A. cruetilemurum (18 seq), A. lavendula (23 seq), A. morrisii (6 seq), A. novinupta (3 seq), A. orsonii (2 seq), A. porphyria (11 seq), and A. sp-MO03 (1 seq).